Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916792.1_cds_XP_016466468.1_59317
CDS Infomation

[gene=LOC107789207] [db_xref=GeneID:107789207] [protein=suppressor of mec-8 and unc-52 protein homolog 1-like] [protein_id=XP_016466468.1] [location=complement(join(78939..79037,79218..79269,79645..79745,80748..80855,80974..81033,81157..81283,81536..81663,82318..82413,82693..82746,82819..82905,85230..85333,86101..86184,86853..86901,87292..87444,89346..89556,89646..89677))] [gbkey=CDS]
Sequence

ATGTCTTCTACCCTTGAAATCGAAGCTCGAGATGTGATTAAGATAGTTCTTCAATTTTGC
AAGGAGAATTCATTGCATCAAAGTTTTCAGGTTTTACAAAATGAGTGCCAAGTTTCACTG
AATACAGTGGATAGTCTTGAAACATTTGTTGCTGATATTAATAGTGGAAGATGGGATGCA
GTATTACCTCAAGTTGCTCAACTTAAGCTTCCTAGACATATACTTGAGGATTTGTATGAG
CAGATAGTTTTGGAAATGATTGAACTTCGGGAGATGGATACTGCAAGGGCTATTTTAAGA
CAAACAAACGTGATGGGTGTCATTAAACAGGAGCAACCAGAAAGATATCTGAGGCTTGAA
CATCTGCTAGTCCGGACTTACTTTGATCCACATGAGGCTTATGCAGATTCAACCAAAGAA
AAGAGGCGTGCACAAATTGCACAAGCACTCTCTCAAGAGGTTTCTGTTGTTCCACCTTCA
CGACTAATGGCTTTGATCGGTCAGGCCCTGAAGTGGCAGCAGCATCAAGGTCTACTTCCA
CCTGGTACTCAATTTGACCTATTCCGAGGAACAGCTGCCATGAAACAAGATGAAGAAGAT
ATGTATCCAACAACTCTTGGGCACACTATTAAGTTCGGGAAGAAAAGTCACCCAGAGTGT
GCTAGGTTCTCACCAGACGGACAATTCCTTGTCTCATGTTCAGTTGATGGATTTATTGAG
GTTTGGGACCACATAAGTGGAAAACTGAAGAAGGATCTCCAGTACCAGGCTGATGAAACC
TTTATGATGCATGATGATGCTGTCCTTTGTGTTGATTTCAGCAGAGACTCGGAAATGCTT
GCATCTGGGTCTCAAGATGGAAAAATAAAGGTTTGGCGCATAAGGACGGGTCAGTGCTTG
CGCCGTCTTGAACGTGCACACTCTCAGGGTGTCACCAGTATAGCCTTCTCTCGAGATGGA
ACTCAGATCTTAAGCACGTCATTTGACAGCACAGCAAGAATTCACGGTCTGAAGTCAGGA
AAGTTGTTAAAAGAATTTCGCGGCCACTCGTCTTATGTTAATGACGCTATCTTTACTAGT
GATGGATCTCGAGTCATTACCGCATCTAGTGATGGCTCAGTGAAGGTCTGGGATTCGAAA
ACAACCGAGTGTCTACAAACATTTAGACCGCCACCTCCATTAAGGGGCGGTGATGCATCT
GTGAACTCTGTCCATCTTTTCCCTAAGAATACTGACCACATTATTGTGTGTAACAAGACA
TCATCTATTTATCTCATGACACTTCAAGGACAGGTTGTTAAAAGTTTCTCATCTGGTAAA
AGAGAAGGTGGAGATTTTCTCGCTGCTTGTCTATCACCAAAAGGTGAATGGATTTACTCT
GTTGGTGAAGACAGAAATTTGTACTGCTTTGGTTTTCAATCAGGCAAACTGGAGCATCTG
ATGAAGGTACATGAAAAGGAAGTTATTGGTATTACACACCATCCTCATATAAACCTTGTT
GCCACATATGGAGAAGACTGCACTATGAAACTATGGAAGCCTTAG

Peptide Sequence

PEP ID

XP_016466468.1
PEP Infomation

PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1-like [Nicotiana tabacum]
Sequence

MSSTLEIEARDVIKIVLQFCKENSLHQSFQVLQNECQVSLNTVDSLETFVADINSGRWDA
VLPQVAQLKLPRHILEDLYEQIVLEMIELREMDTARAILRQTNVMGVIKQEQPERYLRLE
HLLVRTYFDPHEAYADSTKEKRRAQIAQALSQEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEDMYPTTLGHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSIAFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTS
DGSRVITASSDGSVKVWDSKTTECLQTFRPPPPLRGGDASVNSVHLFPKNTDHIIVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFLAACLSPKGEWIYSVGEDRNLYCFGFQSGKLEHL
MKVHEKEVIGITHHPHINLVATYGEDCTMKLWKP

Transcript Sequence

Gene sequence data has not been registered.